709 results for alignment

arxiv.org/abs/1106.5104v2

Modeling the Alignment Profile of Satellite Galaxies in Clusters

Analyzing the halo and galaxy catalogs from the Millennium simulations at redshifts $z=0,\ 0.5,\ 1$, we determine the alignment profiles of cluster galaxies by measuring the average alignments between the major axes of the pseudo inertia tensors from...

arxiv.org/abs/2002.05200v1

LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment

Pairwise sequence alignment is one of the most computationally intensive kernels in genomic data analysis, accounting for more than 90% of the runtime for key bioinformatics applications. This method is particularly expensive for third-generation seq...

arxiv.org/abs/2406.09264v4

Position: Towards Bidirectional Human-AI Alignment

Recent advances in general-purpose AI underscore the urgent need to align AI systems with human goals and values. Yet, the lack of a clear, shared understanding of what constitutes "alignment" limits meaningful progress and cross-disciplinary collabo...

arxiv.org/abs/1402.5327v2

An improved scoring matrix for multiple sequence alignment

The way for performing multiple sequence alignment is based on the criterion of the maximum scored information content computed from a weight matrix, but it is possible to have two or more alignments to have the same highest score leading to ambiguit...

arxiv.org/abs/2206.02841v1

Researching Alignment Research: Unsupervised Analysis

AI alignment research is the field of study dedicated to ensuring that artificial intelligence (AI) benefits humans. As machine intelligence gets more advanced, this research is becoming increasingly important. Researchers in the field share ideas ac...

arxiv.org/abs/2404.16792v5

Model Extrapolation Expedites Alignment

Given the high computational cost of preference alignment training of large language models (LLMs), exploring efficient methods to reduce the training overhead remains an important and compelling research problem. Motivated by the observation that al...

arxiv.org/abs/2410.11021v1

MAFin: Motif Detection in Multiple Alignment Files

Motivation: Genome and Proteome Alignments, represented by the Multiple Alignment File (MAF) format, have become a standard approach in the field of comparative genomics and proteomics. However, current approaches lack a direct method for motif detec...

arxiv.org/abs/0811.1020v1

Grain Alignment and CMB Polarization Studies

Polarized microwave emission from dust is an important foreground that may contaminate polarized CMB studies unless carefully accounted for. Modeling of polarization from dust requires a quantitative understanding of grain alignment. I review the c...

arxiv.org/abs/2412.16686v2

NILE: Internal Consistency Alignment in Large Language Models

As a crucial step to enhance LLMs alignment with human intentions, Instruction Fine-Tuning (IFT) has a high demand on dataset quality. However, existing IFT datasets often contain knowledge that is inconsistent with LLMs' internal knowledge learned f...

arxiv.org/abs/2511.12155v1

Rethinking Deep Alignment Through The Lens Of Incomplete Learning

Large language models exhibit systematic vulnerabilities to adversarial attacks despite extensive safety alignment. We provide a mechanistic analysis revealing that position-dependent gradient weakening during autoregressive training creates signal d...

arxiv.org/abs/physics/0006045v1

A Novel Approach to Structure Alignment

A novel approach for structure alignment is presented, where the key ingredients are: (1) An error function formulation of the problem simultaneously in terms of binary (Potts) assignment variables and real-valued atomic coordinates. (2) Minimizati...